Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909925.1_cds_XP_016460021.1_53485
CDS Infomation

[gene=LOC107783551] [db_xref=GeneID:107783551] [protein=protein UPSTREAM OF FLC-like] [protein_id=XP_016460021.1] [location=complement(join(33023..33089,33176..33481,34104..34977,35323..35438,35549..35618,35708..35915))] [gbkey=CDS]
Sequence

ATGGATGGGCATATGAAGAAGTACAGGCAGTTGAGTCCAGAGAGAGCAAAAGTTTGGACT
GAGAAATCACCCAAGTATCAGCAGCAGAAGCCACGGTTGAGTAATGGCAAAGTGCCTGTG
GTATACTATCTATGTCGAAATCGACAGCTTGAGCATCCTCATTTCATTGAAGTACCTCTG
TCTTCGCCCGAGGGTTTTTACTTGAGGGATGTAATTGAGAGGCTTAACGTTTTGAGAGGC
CGAGGAATGGCTTCATTATACTCGTGGTCTTGCAAAAGAAGCTACAAAAATGGATTCGTA
TGGCATGATCTTTGTGAAGATGACCTCATTCTTCCTGCCCATGGTAATGAGTATGTTCTT
AAAGGCTCAGAGCTTTTCGATGAATCCAATGCAGGTTGCTTTAGTCCCGCTGGAAATGTT
AGATTGTCAACAAACCCAAAGCTACTACCAGAACCACCATCTTCTAGAAGCCAAGATGAT
TCTTCGTCTTCGTCTAGCATGAATGAGAAAGGTACGAAGAATTCTCAAGATGATGAATCA
TCACCACCTGTTCAGCTTCCAGGTTCTTCAGCAGTATCCCCTCAGTCCAGTGCTGGTAAA
AGTTCTTTATGGAATGGTTCATTAAGTCTGACAGAGTACAAGATATATAAGGCCAAAGGG
CTGGCTGATGCTTCAACTCAGACTGAGGAAAATGCAAGCAAAGCTACACGTCCAGAAACT
TGCACAAGAGGTGTTTCTACAGATGACGGGTCTGTAGAGCCTGAAAGTAATGAAATACAA
GAGGTTCAGGTTCAACAGGCAAATGAATCTGCAGAGATATGCCGGGAGACAGTATCGCCT
GCTCCATCCTCATCGAGTGCATCATCGTCAGGTGGTAGAACAGATACCTTGGAAAACCTC
ATCAGAGCTGATATAAATAAGCTCAACAGCTTTAGAATAATTGAAGGGGAGGAGTTTCGA
GTTCCAAAAACTAAGCTAAAGCCCTCGAATGTGCTGATGCAACTAATTTCTTGTGGATCA
ATTTCAGTAAAAGATCATAGCTTTGGCCTTATTCCTACTTACAGGCCAAGATTTTCGCAT
TCAAAATTTCCATCTCCTCTGTTCTCGACCTCATTAACTTTAGGAGATCTTGATTGCCTG
GCTGAGAATCCTAGGTTTATGGGTTTGAGATTGGAAGATAAAGAATACTTCAGTGGCAGC
CTGCTCGAGATGAATATGCCCAAGGAACCTACTATTCTAAAGCGGTCGTCTTCTTACAAT
GCTGACAGGACAAATAAAGAACTTGGAGATTCAGCTGAAGAAAAAGAGGAGAAAAGCTCA
GGCACAAAGTGCATTCCACGTTCAATCAAGGCTTCCCTGAATAAGCAGCAGGCAAGAAGC
GAGACAATGAAATCCCCTCTTTCTGAAGGTCCTAGAATATCATCAGATAGAATAGGCAGT
TCACGAACCATTACACCTGGCACATCCTGTGGAGGAAGCAAGCGAATTACAGAGCCATCA
TCCGGCAAGAGACACTCGAATAGAATAGACTCTTTCAGAGAGGAGAAAGAAAATGTGATC
AAAATTGAAGAAAGGCTTGCTTCAGGAGCTCGGGTTATAATACAGTCGAAAGGAGCTACT
GACAATGATGATCTCTCTTAG

Peptide Sequence

PEP ID

XP_016460021.1
PEP Infomation

PREDICTED: protein UPSTREAM OF FLC-like [Nicotiana tabacum]
Sequence

MDGHMKKYRQLSPERAKVWTEKSPKYQQQKPRLSNGKVPVVYYLCRNRQLEHPHFIEVPL
SSPEGFYLRDVIERLNVLRGRGMASLYSWSCKRSYKNGFVWHDLCEDDLILPAHGNEYVL
KGSELFDESNAGCFSPAGNVRLSTNPKLLPEPPSSRSQDDSSSSSSMNEKGTKNSQDDES
SPPVQLPGSSAVSPQSSAGKSSLWNGSLSLTEYKIYKAKGLADASTQTEENASKATRPET
CTRGVSTDDGSVEPESNEIQEVQVQQANESAEICRETVSPAPSSSSASSSGGRTDTLENL
IRADINKLNSFRIIEGEEFRVPKTKLKPSNVLMQLISCGSISVKDHSFGLIPTYRPRFSH
SKFPSPLFSTSLTLGDLDCLAENPRFMGLRLEDKEYFSGSLLEMNMPKEPTILKRSSSYN
ADRTNKELGDSAEEKEEKSSGTKCIPRSIKASLNKQQARSETMKSPLSEGPRISSDRIGS
SRTITPGTSCGGSKRITEPSSGKRHSNRIDSFREEKENVIKIEERLASGARVIIQSKGAT
DNDDLS

Transcript Sequence

Gene sequence data has not been registered.